ffpopsim_highd.h File Reference

#include "ffpopsim_generic.h"
#include <map>
#include <set>
#include <vector>
#include <iostream>
#include <string>
#include <sstream>
#include <list>
#include <gsl/gsl_histogram.h>

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Classes
struct	coeff_t
	Trait coefficient for a set of loci. More...
struct	coeff_single_locus_t
	Trait coefficient for a single locus. More...
class	hypercube_highd
	Hypercube class for high-dimensional simulations. More...
struct	clone_t
	clone with a single genotype and a vector of phenotypic traits. More...
struct	tree_key_t
struct	step_t
struct	node_t
struct	edge_t
struct	poly_t
class	rooted_tree
class	multi_locus_genealogy
class	haploid_highd
	Population class for high-dimensional simulations. More...

Macros
#define	HCF_MEMERR   -131545
#define	HCF_BADARG   -131546
#define	HCF_VERBOSE   0
#define	WORDLENGTH   28
#define	HP_VERBOSE   0
#define	NO_GENOTYPE   -1
#define	HP_MINAF   0.02
#define	MAX_DELTAFITNESS   8
#define	MAX_POPSIZE   500000
#define	HP_NOTHING   1e-12
#define	HP_RANDOM_SAMPLE_FRAC   0.01
#define	HP_VERY_NEGATIVE   -1e15
#define	HP_BADARG   -879564
#define	HP_MEMERR   -986465
#define	HP_EXPLOSIONWARN   4
#define	HP_EXTINCTERR   5
#define	HP_NOBINSERR   6
#define	HP_WRONGBINSERR   7
#define	HP_RUNTIMEERR   8
#define	rooted_tree_H_
#define	RT_VERBOSE   0
#define	RT_VERYLARGE   10000000
#define	RT_CHILDNOTFOUND   -35343
#define	RT_NODENOTFOUND   -35765
#define	MULTILOCUSGENEALOGY_H_

Macro Definition Documentation

#define HCF_BADARG   -131546

#define HCF_MEMERR   -131545

#define HCF_VERBOSE   0

#define HP_BADARG   -879564

#define HP_EXPLOSIONWARN   4

#define HP_EXTINCTERR   5

#define HP_MEMERR   -986465

#define HP_MINAF   0.02

#define HP_NOBINSERR   6

#define HP_NOTHING   1e-12

#define HP_RANDOM_SAMPLE_FRAC   0.01

#define HP_RUNTIMEERR   8

#define HP_VERBOSE   0

#define HP_VERY_NEGATIVE   -1e15

#define HP_WRONGBINSERR   7

#define MAX_DELTAFITNESS   8

#define MAX_POPSIZE   500000

#define MULTILOCUSGENEALOGY_H_

#define NO_GENOTYPE   -1

#define rooted_tree_H_

#define RT_CHILDNOTFOUND   -35343

#define RT_NODENOTFOUND   -35765

#define RT_VERBOSE   0

#define RT_VERYLARGE   10000000

#define WORDLENGTH   28