FFPopSim  2.0
Library for Population Genetics
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rooted_tree Member List

This is the complete list of members for rooted_tree, including all inherited members.

add_generation(vector< node_t > &new_generation, double mean_fitness)rooted_tree
add_terminal_node(node_t &newNode)rooted_tree
ancestors_at_age(int age, tree_key_t subtree_root, vector< tree_key_t > &ancestors)rooted_tree
bridge_edge_node(tree_key_t to_be_bridged)rooted_tree
calc_weight_distribution(tree_key_t subtree_root)rooted_tree
check_node(tree_key_t node)rooted_tree
check_tree_integrity()rooted_tree
clear_tree()rooted_tree
construct_subtree(vector< tree_key_t > subtree_leafs, rooted_tree &other)rooted_tree
delete_extra_children(tree_key_t subtree_root)rooted_tree
delete_one_child_nodes(tree_key_t subtree_root)rooted_tree
edgesrooted_tree
erase_child(map< tree_key_t, node_t >::iterator Pnode, tree_key_t to_be_erased)rooted_tree
erase_edge_node(tree_key_t to_be_erased)rooted_tree
external_branch_length()rooted_tree
get_MRCA()rooted_treeinline
leafsrooted_tree
MRCArooted_tree
nodesrooted_tree
print_newick()rooted_tree
print_weight_distribution(tree_key_t node_key)rooted_tree
reset()rooted_tree
rootrooted_tree
rooted_tree()rooted_tree
SFS(gsl_histogram *sfs)rooted_tree
subtree_newick(tree_key_t root)rooted_tree
total_branch_length()rooted_tree
update_leaf_to_root(tree_key_t leaf)rooted_tree
update_tree()rooted_tree
~rooted_tree()rooted_treevirtual