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Library for Population Genetics
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haploid_lowd Member List
This is the complete list of members for
haploid_lowd
, including all inherited members.
allele_entropy
()
haploid_lowd
calculate_recombinants_free
()
haploid_lowd
protected
calculate_recombinants_general
()
haploid_lowd
protected
calculate_recombinants_single
()
haploid_lowd
protected
carrying_capacity
haploid_lowd
circular
haploid_lowd
evolve
(int gen=1)
haploid_lowd
evolve_deterministic
(int gen=1)
haploid_lowd
evolve_norec
(int gen=1)
haploid_lowd
fitness
haploid_lowd
generation
haploid_lowd
protected
genotype_entropy
()
haploid_lowd
get_allele_frequency
(int locus)
haploid_lowd
inline
get_chi
(int locus)
haploid_lowd
inline
get_chi2
(int locus1, int locus2)
haploid_lowd
inline
get_fitness
(int genotype)
haploid_lowd
inline
get_fitness_statistics
()
haploid_lowd
get_generation
()
haploid_lowd
inline
get_genotype_frequency
(int genotype)
haploid_lowd
inline
get_LD
(int locus1, int locus2)
haploid_lowd
inline
get_moment
(int locus1, int locus2)
haploid_lowd
inline
get_mutation_rate
(int locus, int direction)
haploid_lowd
inline
get_number_of_loci
()
haploid_lowd
inline
get_pair_frequency
(int locus1, int locus2)
haploid_lowd
inline
get_population_size
()
haploid_lowd
inline
get_random_seed
()
haploid_lowd
protected
get_recombination_model
()
haploid_lowd
inline
get_recombination_rate
(int locus)
haploid_lowd
haploid_lowd
(int L=1, int rng_seed=0)
haploid_lowd
L
()
haploid_lowd
inline
long_time_generation
haploid_lowd
protected
marginalize_recombination_patterns
()
haploid_lowd
protected
mutants
haploid_lowd
protected
mutate
()
haploid_lowd
protected
mutation_rates
haploid_lowd
protected
N
()
haploid_lowd
inline
number_of_loci
haploid_lowd
protected
outcrossing_rate
haploid_lowd
population
haploid_lowd
population_size
haploid_lowd
protected
recombinants
haploid_lowd
protected
recombination_model
haploid_lowd
protected
recombination_patterns
haploid_lowd
protected
recombine
()
haploid_lowd
protected
resample
()
haploid_lowd
protected
rng
haploid_lowd
protected
seed
haploid_lowd
protected
select
()
haploid_lowd
protected
set_allele_frequencies
(double *frequencies, unsigned long N)
haploid_lowd
set_generation
(double g)
haploid_lowd
inline
set_genotypes
(vector< index_value_pair_t > gt)
haploid_lowd
set_mutation_rates
(double m)
haploid_lowd
set_mutation_rates
(double m1, double m2)
haploid_lowd
set_mutation_rates
(double *m)
haploid_lowd
set_mutation_rates
(double **m)
haploid_lowd
set_recombination_model
(int rec_model)
haploid_lowd
set_recombination_patterns
(vector< index_value_pair_t > iv)
haploid_lowd
protected
set_recombination_rates
(double *rec_rates, int rec_model=-1)
haploid_lowd
set_recombination_rates_general
(double *rec_rates)
haploid_lowd
protected
set_recombination_rates_single_crossover
(double *rec_rates)
haploid_lowd
protected
set_wildtype
(unsigned long N)
haploid_lowd
~haploid_lowd
()
haploid_lowd
virtual
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